Combinatorial Pattern Matching 20th Annual Symposium, CPM 2009 Lille, France, June 22-24, 2009 Proceedings / edited by Gregory Kucherov, Esko Ukkonen.

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Bibliographic Details
Corporate Author: SpringerLink (Online service)
Other Authors: Kucherov, Gregory (Editor), Ukkonen, Esko (Editor)
Format: eBook
Language:English
Published: Berlin, Heidelberg : Springer Berlin Heidelberg : Imprint: Springer, 2009.
Edition:1st ed. 2009.
Series:Theoretical Computer Science and General Issues ; 5577
Springer eBook Collection.
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Table of Contents:
  • CPM’s 20th Anniversary: A Statistical Retrospective
  • Quasi-distinct Parsing and Optimal Compression Methods
  • Generalized Substring Compression
  • Text Indexing, Suffix Sorting, and Data Compression: Common Problems and Techniques
  • Contracted Suffix Trees: A Simple and Dynamic Text Indexing Data Structure
  • Linear Time Suffix Array Construction Using D-Critical Substrings
  • On the Value of Multiple Read/Write Streams for Data Compression
  • Reoptimization of the Shortest Common Superstring Problem
  • LCS Approximation via Embedding into Local Non-repetitive Strings
  • An Efficient Matching Algorithm for Encoded DNA Sequences and Binary Strings
  • Fast Searching in Packed Strings
  • New Complexity Bounds for Image Matching under Rotation and Scaling
  • Online Approximate Matching with Non-local Distances
  • Faster and Space-Optimal Edit Distance “1” Dictionary
  • Approximate Matching for Run-Length Encoded Strings Is 3sum-Hard
  • Modeling and Algorithmic Challenges in Online Social Networks
  • Permuted Longest-Common-Prefix Array
  • Periodic String Comparison
  • Deconstructing Intractability: A Case Study for Interval Constrained Coloring
  • Maximum Motif Problem in Vertex-Colored Graphs
  • Fast RNA Structure Alignment for Crossing Input Structures
  • Sparse RNA Folding: Time and Space Efficient Algorithms
  • Multiple Alignment of Biological Networks: A Flexible Approach
  • Graph Mining: Patterns, Generators and Tools
  • Level-k Phylogenetic Networks Are Constructable from a Dense Triplet Set in Polynomial Time
  • The Structure of Level-k Phylogenetic Networks
  • Finding All Sorting Tandem Duplication Random Loss Operations
  • Average-Case Analysis of Perfect Sorting by Reversals
  • Statistical Properties of Factor Oracles
  • Haplotype Inference Constrained by Plausible Haplotype Data
  • Efficient Inference of Haplotypes from Genotypes on a Pedigree with Mutations and Missing Alleles (Extented Abstract).